The detailed information of tRNA gene sequence


Sequence ID>C171024778
Genome IDCP013447
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia ubonensis MSMB1189WGS [CP013445, CP013446, CP013447]
Start position on genome 1017873
End posion on genome 1017968
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttcccccaa
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCCGGACTTCAAATCCGGTTAGGGGCGTCAGACG
CTCCTGGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tgccaggctt
Secondary structure (Cloverleaf model)
>C171024778	SeC(p)	TCA
                   a      GCCA tgccaggctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        T      | + | | |     G
    G       A T G C       G T A G G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTAGGGGCGTCAGACGCTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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