The detailed information of tRNA gene sequence


Sequence ID>C171025032
Genome IDCP013461
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia stagnalis MSMB735WGS [CP013459, CP013460, CP013461]
Start position on genome 942147
End posion on genome 942242
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttccccaa
tRNA gene sequence 
GGAAGGCATCCGTATCCGGTGGTGCGGCTGGACTTCAAATCCAGTAGGGGGCGTCAGACG
CTCCCTGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
ttcaacgctt
Secondary structure (Cloverleaf model)
>C171025032	SeC(p)	TCA
                   a      GCCA ttcaacgctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C T        C      | + | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G G          G     TAGGGGGCGTCAGACGCTCCCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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