The detailed information of tRNA gene sequence


Sequence ID>C171038481
Genome IDCP015413
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas luteoviolacea S40542 [CP015413, CP015414]
Start position on genome 43887
End posion on genome 43963
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aacattgttt
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCAAG
TCTACTCAGACCCACCA
Downstream region at tRNA end position 
cttctttccg
Secondary structure (Cloverleaf model)
>C171038481	Ile	GAT
                   t      ACCA cttctttccg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     T C A T C     A
      C G A        A      + | | | |     A
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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