The detailed information of tRNA gene sequence


Sequence ID>C171038721
Genome IDCP015415
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas luteoviolacea S4054 [CP015415, CP015416]
Start position on genome 3480643
End posion on genome 3480554
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctttcagtgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAGGCGCACGACTGGAACTCGTGTATAGGTTAACCCCTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttctttcct
Secondary structure (Cloverleaf model)
>C171038721	Ser	GGA
                   c      GCCA tttctttcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TATAGGTTAACCCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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