The detailed information of tRNA gene sequence


Sequence ID>C171039575
Genome IDCP015583
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseomonas gilardii U14-5 [CP015583, CP015584]
Start position on genome 1835382
End posion on genome 1835309
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgggcggcgt
tRNA gene sequence 
GGCTCCGTGCCCGAGTGGTTAGGGAGCGGTCTGCAAAACCGTGTACGGCGGTTCGATTCC
GCCCGGAGCCTCCA
Downstream region at tRNA end position 
cacccccatt
Secondary structure (Cloverleaf model)
>C171039575	Cys	GCA
                   t      TCCA cacccccatt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T T
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     G C C C       G G C G G     C
      G       | | |                 T T
      G     A G G G
        T T        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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