The detailed information of tRNA gene sequence


Sequence ID>C171047046
Genome IDCP016306
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. KC8 [CP016306]
Start position on genome 3437463
End posion on genome 3437554
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agccgatccc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGGTTTGCTAAACCGTCGTACCCTGAATAGGG
TACCCCGGGTTCGAATCCCGGCGTCTCCGCCA
Downstream region at tRNA end position 
tcatgtacgg
Secondary structure (Cloverleaf model)
>C171047046	Ser	GCT
                   c      GCCA tcatgtacgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G T G G       C C G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACCCTGAATAGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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