The detailed information of tRNA gene sequence


Sequence ID>C171047054
Genome IDCP016306
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. KC8 [CP016306]
Start position on genome 4045894
End posion on genome 4045805
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctcgaatgc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATTGGGACGGTCTCGAAAACCGTTGTGCCGGTAACGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctttccttta
Secondary structure (Cloverleaf model)
>C171047054	Ser	CGA
                   c      GCCA ctttccttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TGTGCCGGTAACGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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