The detailed information of tRNA gene sequence


Sequence ID>C171047072
Genome IDCP016306
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. KC8 [CP016306]
Start position on genome 1188768
End posion on genome 1188684
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcaacgccgt
tRNA gene sequence 
GCGGGCGTGGTGAAACTGGTAGACGCGCCGGACTCAAAATCCGGTTCCGCAAGGAGTGTC
GGTTCGAGCCCGACCGCCCGCACCA
Downstream region at tRNA end position 
tatctggcct
Secondary structure (Cloverleaf model)
>C171047072	Leu	CAA
                   t      ACCA tatctggcct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     C A G C C     A
      C A A        G      | | | | |     G
    T       A G T G       G T C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TTCCGCAAGGAGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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