The detailed information of tRNA gene sequence


Sequence ID>C171047192
Genome IDCP016312
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus brockianus GE-1 [CP016312]
Start position on genome 352674
End posion on genome 352767
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcggcactt
tRNA gene sequence 
GGAGAGGTGCCCGAGTGGCTGAAGGGACACGACTGGAAATCGTGTAGGCGGGCTTAAACC
TGCCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
accccaagcc
Secondary structure (Cloverleaf model)
>C171047192	Ser	GGA
                   t      GCCA accccaagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        A     TAGGCGGGCTTAAACCTGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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