The detailed information of tRNA gene sequence


Sequence ID>C171047195
Genome IDCP016312
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus brockianus GE-1 [CP016312]
Start position on genome 802912
End posion on genome 802987
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gccaaggcgg
tRNA gene sequence 
GGGCCGTTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGTTGGAGGTTCGAGT
CCTTCACGGCCCGCCA
Downstream region at tRNA end position 
gcgcgccctc
Secondary structure (Cloverleaf model)
>C171047195	Trp	CCA
                   g      GCCA gcgcgccctc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C T T C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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