The detailed information of tRNA gene sequence


Sequence ID>C171047233
Genome IDCP016312
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus brockianus GE-1 [CP016312]
Start position on genome 543233
End posion on genome 543159
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaaaggctga
tRNA gene sequence 
GGGCGGCTAGCTCAGCGGAAGAGCGCTCGCCTCACACGCGAGAGGTCGTAGGTTCAAGTC
CTACGCCGCCCACCA
Downstream region at tRNA end position 
aaccaccctc
Secondary structure (Cloverleaf model)
>C171047233	Val	CAC
                   a      ACCA aaccaccctc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G          T G
                    T     C A T C C     A
        G A        A      | | | | |     A
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        A A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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