The detailed information of tRNA gene sequence


Sequence ID>C171047620
Genome IDCP016341
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella holmesii H903 [CP016341]
Start position on genome 298902
End posion on genome 298997
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ctatgccaag
tRNA gene sequence 
GGAAGGCATGCGTGCCCGGTGGCACGGCTGGGCTTCAAACCCAGTTGGGGGTGTCAGACA
CTCCCAGGTAGGTTCGACTCCTGCTGCCTTCCGCCA
Downstream region at tRNA end position 
tctcttgcac
Secondary structure (Cloverleaf model)
>C171047620	SeC	TCA
                   g      GCCA tctcttgcac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G T C C     A
      C C C        G      | + | | |     G
    G       G T G C       G T A G G     C
    G       | | | |                 T T
    T       C A C G
      G G          G     TTGGGGGTGTCAGACACTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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