The detailed information of tRNA gene sequence


Sequence ID>C171049949
Genome IDCP016460
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBlastomonas sp. RAC04 [CP016460]
Start position on genome 306567
End posion on genome 306477
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggacaagc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATAGGTCAAAAGCCT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
gtacccccca
Secondary structure (Cloverleaf model)
>C171049949	Ser	GGA
                   c      GCCA gtacccccca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGTCAAAAGCCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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