The detailed information of tRNA gene sequence


Sequence ID>C171051553
Genome IDCP016819
Search identical group
Phylum/ClassActinomycetota
SpeciesRhodococcus sp. p52 [CP016819]
Start position on genome 3105966
End posion on genome 3106060
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gggtgagcgc
tRNA gene sequence 
GGAGGTGGTTCTCGTCTGGTGACGGTCGCGGTCTTCAAAACCGTTGTGGCCCAGTATCTG
GGCTGGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
aatgttttcg
Secondary structure (Cloverleaf model)
>C171051553	SeC(p)	TCA
                   c      GCCA aatgttttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C          T T
                    T     T G C C C     A
      T C T        T      + | | | |     G
    G       G C T C       G C G G G     C
    G       | | +                   T T
    T       C G G T
      G A          C     TGTGGCCCAGTATCTGGGCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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