The detailed information of tRNA gene sequence


Sequence ID>C171057328
Genome IDCP017113
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPorphyrobacter sp. LM 6 [CP017113]
Start position on genome 1010277
End posion on genome 1010367
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgggcatgc
tRNA gene sequence 
GGAGCAGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGTCAAAAGCGT
ATCGAGGGTTCGAATCCCTCCTGCTCCGCCA
Downstream region at tRNA end position 
tttaacccat
Secondary structure (Cloverleaf model)
>C171057328	Ser	GGA
                   c      GCCA tttaacccat
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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