The detailed information of tRNA gene sequence


Sequence ID>C171057358
Genome IDCP017113
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPorphyrobacter sp. LM 6 [CP017113]
Start position on genome 1388453
End posion on genome 1388378
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gccgcggtca
tRNA gene sequence 
GCCGGCTTAGCTCAGTTGGTAGAGCAGTTGATTTGTAATCATCAGGTCGTTGGTTCGATT
CCGACAGCCGGCACCG
Downstream region at tRNA end position 
cacctcccgc
Secondary structure (Cloverleaf model)
>C171057358	Thr	TGT
                   a      ACCG cacctcccgc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T T
                    T     C A G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    T   T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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