The detailed information of tRNA gene sequence


Sequence ID>C171060570
Genome IDCP017305
Search identical group
Phylum/ClassChlorobiota
SpeciesChlorobaculum limnaeum DSM 1677 [CP017305]
Start position on genome 2727344
End posion on genome 2727269
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cttctgtttc
tRNA gene sequence 
GGGGCTTTAGCTCAGTTGGTAGAGCGTCTCGTTCGCAATGAGAAGGTCAGGGGTTCGACT
CCCCTAAGCTCCACAA
Downstream region at tRNA end position 
accccgccgg
Secondary structure (Cloverleaf model)
>C171060570	Ala	CGC
                   c      ACAA accccgccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     T - A          T C
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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