The detailed information of tRNA gene sequence


Sequence ID>C171060620
Genome IDCP017311
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHydrogenophaga sp. PBC [CP017311]
Start position on genome 4112699
End posion on genome 4112626
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggcccgatct
tRNA gene sequence 
GGCGCGTTAGCAAAGCGGTTATGCAACGGATTGCAAATCCGTCTAGGGCGGTTCGACTCC
GCCACGCGCCTCCA
Downstream region at tRNA end position 
gacgagcaat
Secondary structure (Cloverleaf model)
>C171060620	Cys	GCA
                   t      TCCA gacgagcaat
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     C C G C C     A
        G A        A      | | | | |     G
      C     A A C G       G G C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     CTAG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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