The detailed information of tRNA gene sequence


Sequence ID>C171062116
Genome IDCP017415
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAcidihalobacter yilgarnensis F5 [CP017415]
Start position on genome 1247393
End posion on genome 1247483
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaacggtaca
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGTAATCCCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttaattgca
Secondary structure (Cloverleaf model)
>C171062116	Ser	GGA
                   a      GCCA tttaattgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGTAATCCCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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