The detailed information of tRNA gene sequence


Sequence ID>C171062119
Genome IDCP017415
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAcidihalobacter yilgarnensis F5 [CP017415]
Start position on genome 1717437
End posion on genome 1717529
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccgcgccctc
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCACACCGGCACCGACTCGAAATCGGTTGGGGGCTTTACCGC
CCCACGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tataatacat
Secondary structure (Cloverleaf model)
>C171062119	Ser	CGA
                   c      GCCA tataatacat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  T           | | |                 T T
  C         C C G G
    A C A          C     TGGGGGCTTTACCGCCCCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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