The detailed information of tRNA gene sequence


Sequence ID>C171063192
Genome IDCP017476
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHydrogenophaga crassostreae LPB0072 [CP017476]
Start position on genome 1921604
End posion on genome 1921695
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgaggcttc
tRNA gene sequence 
GGAGCGATGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGCTTTAAATCC
CATCGAGGGTTCGAATCCCTCTCGCTCCTCCA
Downstream region at tRNA end position 
actcaattga
Secondary structure (Cloverleaf model)
>C171063192	Ser	GCT
                   c      TCCA actcaattga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGCTTTAAATCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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