The detailed information of tRNA gene sequence


Sequence ID>C171063208
Genome IDCP017476
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHydrogenophaga crassostreae LPB0072 [CP017476]
Start position on genome 4089190
End posion on genome 4089096
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctccatattc
tRNA gene sequence 
GGAAGGGAAGCGCACCCCGGTGGGGCGCCCGGACTTCAAATCCGGCGAGGCGCGCTCAGC
GCGCCTGGTGGGTTCGACTCCCACTCCCTTCCGCCc
Downstream region at tRNA end position 
gatgcaccgg
Secondary structure (Cloverleaf model)
>C171063208	SeC(p)	TCA
                   c      GCCc gatgcaccgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        G      | | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     CGAGGCGCGCTCAGCGCGCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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