The detailed information of tRNA gene sequence


Sequence ID>C171063579
Genome IDCP017561
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia sprentiae WSM5005 [CP017561, CP017562]
Start position on genome 1707776
End posion on genome 1707686
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gctccccgcc
tRNA gene sequence 
GGAGAGATGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTATAGGTTAATAGCCT
ATCCGGGGTTCGAATCCCCGTCTCTCCGCCA
Downstream region at tRNA end position 
gaacgaaaca
Secondary structure (Cloverleaf model)
>C171063579	Ser	GGA
                   c      GCCA gaacgaaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        G      | | | | |     G
    G       G T A G       C G G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TATAGGTTAATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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