The detailed information of tRNA gene sequence


Sequence ID>C171066984
Genome IDCP017748
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus sp. USMAA2-4 [CP017748, CP017749]
Start position on genome 1325956
End posion on genome 1325867
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acaagttcca
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGTACCTGACTCGAAATCAGGCGTACGTGCAAGCGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aatagaaaaa
Secondary structure (Cloverleaf model)
>C171066984	Ser	CGA
                   a      GCCA aatagaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       + | | +                 T T
    T       T T G T
      C G A        A     CGTACGTGCAAGCGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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