The detailed information of tRNA gene sequence


Sequence ID>C171066990
Genome IDCP017749
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus sp. USMAA2-4 [CP017748, CP017749]
Start position on genome 1342939
End posion on genome 1343014
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agttatccga
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGTCATCCTCCACCA
Downstream region at tRNA end position 
tcgaccttgg
Secondary structure (Cloverleaf model)
>C171066990	Ala	TGC
                   a      ACCA tcgaccttgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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