The detailed information of tRNA gene sequence


Sequence ID>C171067072
Genome IDCP017752
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus sp. USMAHM13 [CP017751, CP017752]
Start position on genome 1902704
End posion on genome 1902609
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agggccatga
tRNA gene sequence 
GGAAAGCAGGCGTATCCGGTGATGCGGCCGGGCTTCAAACCCGGTTGGGGGCGTCAGCCG
TTCCCAGGTAGGTTCGACTCCTACTGCTTTCCGCCA
Downstream region at tRNA end position 
caagatttcc
Secondary structure (Cloverleaf model)
>C171067072	SeC	TCA
                   a      GCCA caagatttcc
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T          T C
                    G     C A T C C     A
      C C T        G      | | | | |     G
    G       A T G C       G T A G G     C
    G       | + | |                 T T
    T       T G C G
      G A          G     TTGGGGGCGTCAGCCGTTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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