The detailed information of tRNA gene sequence


Sequence ID>C171070440
Genome IDCP017953
Search identical group
Phylum/ClassBacillota
SpeciesBacillus amyloliquefaciens Y14 [CP017953]
Start position on genome 23678
End posion on genome 23770
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgtcgatac
tRNA gene sequence 
GGAGGAATACCCAAGTCTGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGGTGTCAAAG
CCCGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Downstream region at tRNA end position 
tattgatttt
Secondary structure (Cloverleaf model)
>C171070440	Ser	TGA
                   c      GCCA tattgatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  T         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGGTGTCAAAGCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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