The detailed information of tRNA gene sequence


Sequence ID>C171071767
Genome IDCP018029
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlteromonas mediterranea RG65 [CP018029]
Start position on genome 2275012
End posion on genome 2274921
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaaacttca
tRNA gene sequence 
GGAGAGTTGGCAGAGCCCGGTTTAATGCACCTGACTTGAAATCAGACGTGGGGTCAAACC
CACCGGGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
aaatacgaaa
Secondary structure (Cloverleaf model)
>C171071767	Ser	TGA
                   a      GCCA aaatacgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        A     CGTGGGGTCAAACCCACC
                    C   A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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