The detailed information of tRNA gene sequence


Sequence ID>C171072486
Genome IDCP018076
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSulfitobacter alexandrii AM1-D1 [CP018076]
Start position on genome 2239360
End posion on genome 2239454
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cggccttcac
tRNA gene sequence 
GGAGGTGACAGGAGTCTGGTGGCTCCCCTGGTCTTCAAAACCAAGGACGCGTCGCAACGG
CGCGTGGTGGGTTCGATTCCCATCCACCTCCGCCA
Downstream region at tRNA end position 
ctggacatcg
Secondary structure (Cloverleaf model)
>C171072486	SeC(p)	TCA
                   c      GCCA ctggacatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A   C          T T
                    C     T A C C C     A
      T C T        A      + | | | |     G
    G       G A G G       G T G G G     C
    G       | | | |                 T T
    T       C T C C
      G G          C     GGACGCGTCGCAACGGCGCGTG
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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