The detailed information of tRNA gene sequence


Sequence ID>C171072504
Genome IDCP018076
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSulfitobacter alexandrii AM1-D1 [CP018076]
Start position on genome 2290216
End posion on genome 2290127
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agggcatcgc
tRNA gene sequence 
GGAGGTTTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCGGGCGTGAGAGCGTC
CCCAGGGTTCGAATCCCTGAGCCTCCGCCA
Downstream region at tRNA end position 
atacgttcag
Secondary structure (Cloverleaf model)
>C171072504	Ser	TGA
                   c      GCCA atacgttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CGGGCGTGAGAGCGTCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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