The detailed information of tRNA gene sequence


Sequence ID>C171072729
Genome IDCP018097
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAurantiacibacter gangjinensis CGMCC 1.15024 [CP018097, CP018098]
Start position on genome 1092906
End posion on genome 1092815
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgctgggtcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGTTCCCTGCTAAGGAACCATACCTCTATCGGGG
TATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gcggcccgac
Secondary structure (Cloverleaf model)
>C171072729	Ser	GCT
                   c      GCCA gcggcccgac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACCTCTATCGGGGTATC
                    G - C
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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