The detailed information of tRNA gene sequence


Sequence ID>C171072739
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 284232
End posion on genome 284316
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aacctgcaat
tRNA gene sequence 
GCGAAAGTGGCGGAACTGGCAGACGCGCTAGGTTCAGGGTCTAGTGGGCGCAAGCCCGTG
GGGGTTCAAATCCCCCCTTTCGCACac
Downstream region at tRNA end position 
caaagcctcg
Secondary structure (Cloverleaf model)
>C171072739	Leu	CAG
                   t      ACac caaagcctcg
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     C C C C C     A
      C A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGCGCAAGCCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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