The detailed information of tRNA gene sequence


Sequence ID>C171072740
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 547673
End posion on genome 547748
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aacaagaaaa
tRNA gene sequence 
TCCGGCGTAGCTCAATTGGCAGAGCGGGTGGCTGTTAACCACTAGGTTGTAGGTTCGAGT
CCTACCGCCGGAGCAA
Downstream region at tRNA end position 
gaagccttca
Secondary structure (Cloverleaf model)
>C171072740	Asn	GTT
                   a      GCAA gaagccttca
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G + T
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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