The detailed information of tRNA gene sequence


Sequence ID>C171072743
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 1058655
End posion on genome 1058728
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tttacttgac
tRNA gene sequence 
GCTGGCGTAGCTCAATTGGTAGAGCAGCTGATTTGTAATCAGCGGGTTGGGGGTTCAAGT
CCTCTCGCCAGCTCag
Downstream region at tRNA end position 
gctaaagtgt
Secondary structure (Cloverleaf model)
>C171072743	Thr	TGT
                   c      TCag gctaaagtgt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C T C C     A
      T A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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