The detailed information of tRNA gene sequence


Sequence ID>C171072746
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 1060378
End posion on genome 1060452
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcatcagct
tRNA gene sequence 
AGGCGTGTAGCTCAATTGGCTAGAGCACTGGTCTCCAAAACCAGGGGTTGGGGGTTCGAG
TCCCTCCACGCCTGCtg
Downstream region at tRNA end position 
atttttttga
Secondary structure (Cloverleaf model)
>C171072746	Trp	CCA
                   t      GCtg atttttttga
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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