The detailed information of tRNA gene sequence


Sequence ID>C171072752
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 2426108
End posion on genome 2426181
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
agattaaact
tRNA gene sequence 
GCACCTGTAGCTCAATTGGTAGAGCAGCGGACTCTTAATCCGTTGGTTGAAGGTTCGAGT
CCTTCCAGGTGCACgt
Downstream region at tRNA end position 
aataaaaaca
Secondary structure (Cloverleaf model)
>C171072752	Lys	CTT
                   t      ACgt aataaaaaca
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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