The detailed information of tRNA gene sequence


Sequence ID>C171072755
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 4552285
End posion on genome 4552359
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attgtcccat
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGCAGCGCACCTGCCTTGGGAGCAGGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACtt
Downstream region at tRNA end position 
cgttgcgccc
Secondary structure (Cloverleaf model)
>C171072755	Pro	TGG
                   t      ACtt cgttgcgccc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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