The detailed information of tRNA gene sequence


Sequence ID>C171072760
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 4813545
End posion on genome 4813468
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataaggtctt
tRNA gene sequence 
GGTCCGGTAGTTCAATTTGGTTAGAGCACCTGCCTGTCACGCAGGAAGTTGCGGGTTCGA
GTCCCGTCCGGACCGCCT
Downstream region at tRNA end position 
gaaagtggtt
Secondary structure (Cloverleaf model)
>C171072760	Asp	GTC
                   t      GCCT gaaagtggtt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T T A A        A      + | | | |     G
  T         C T T G       G C G G G     C
  G         | | + |                 T T
  G         G A G C
    T T A          A     AAGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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