The detailed information of tRNA gene sequence


Sequence ID>C171072768
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 3170585
End posion on genome 3170501
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
caaatgaatt
tRNA gene sequence 
GGGGAGGTTGCGGAGCGGTCAAACGCAGCAGACTGTAAATCTGCCGGCCGAGTGCCTTCG
GAGGTTCGAATCCTTCCCTCCCCACtt
Downstream region at tRNA end position 
aacaggccct
Secondary structure (Cloverleaf model)
>C171072768	Tyr	GTA
                   t      ACtt aacaggccct
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | + | | |     G
    G       G G C G       G G A G G     C
    G         | | |                 T T
    T       A C G C
      C A A        A     CGGCCGAGTGCCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.-

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