The detailed information of tRNA gene sequence


Sequence ID>C171072772
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 3009795
End posion on genome 3009720
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttttttttaa
tRNA gene sequence 
GGCGACGTACCCAAGTGGCTAAGGGAGAGGTCTGCAAAACCTCGATTCGCCGGTTCGAAT
CCGGCCGTCGCCTCGA
Downstream region at tRNA end position 
agtttaaatc
Secondary structure (Cloverleaf model)
>C171072772	Cys	GCA
                   a      TCGA agtttaaatc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | | | | |     G
    G       A C C C       G C C G G     C
    G         | | |                 T T
    C       A G G G
      T A          A     GATTC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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