The detailed information of tRNA gene sequence


Sequence ID>C171072774
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 2879267
End posion on genome 2879192
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggcgaaaatt
tRNA gene sequence 
GCCCCTGTAGCTCAGAGGATAGAGCAGAGGCTTCCTAAGCCTTGTGTCGGGAGTTCGAAT
CTCTCCAGGGGCACGA
Downstream region at tRNA end position 
acgggaggag
Secondary structure (Cloverleaf model)
>C171072774	Arg	CCT
                   t      ACGA acgggaggag
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C T C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G A G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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