The detailed information of tRNA gene sequence


Sequence ID>C171072777
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 1265501
End posion on genome 1265417
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gcaacgcttt
tRNA gene sequence 
GCGAGGATGGCGGAATTGGCAGACGCGCCAGACTTAGGATCTGGTGCCCGCAAGGGCGTG
GGGGTTCAAGTCCCCCTTCTCGCACtt
Downstream region at tRNA end position 
tttatttttg
Secondary structure (Cloverleaf model)
>C171072777	Leu	TAG
                   t      ACtt tttatttttg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T
                     A - T          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGCCCGCAAGGGCGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.-

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