The detailed information of tRNA gene sequence


Sequence ID>C171074075
Genome IDCP018154
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingorhabdus lutea LPB0140 [CP018154]
Start position on genome 619548
End posion on genome 619637
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtttgttgc
tRNA gene sequence 
GGACACGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATAGGGGTGACTCTA
TCGTGGGTTCGAATCCCACCGTGTCCGCCA
Downstream region at tRNA end position 
tttaattata
Secondary structure (Cloverleaf model)
>C171074075	Ser	GGA
                   c      GCCA tttaattata
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATAGGGGTGACTCTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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