The detailed information of tRNA gene sequence


Sequence ID>C171083839
Genome IDCP018787
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesOxalobacter formigenes HC-1 [CP018787]
Start position on genome 922857
End posion on genome 922764
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attccagtac
tRNA gene sequence 
GGAGATGTGGCCGAGAGGTCGAAGGCACTCCCCTGCTAAGGGAGCATACGGGCCAAAACT
CGTATCAAGGGTTCGAATCCCTTCATCTCCGCCA
Downstream region at tRNA end position 
gaattcattt
Secondary structure (Cloverleaf model)
>C171083839	Ser	GCT
                   c      GCCA gaattcattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATACGGGCCAAAACTCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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