The detailed information of tRNA gene sequence


Sequence ID>C171085939
Genome IDCP018888
Search identical group
Phylum/ClassBacillota
SpeciesAmylolactobacillus amylophilus DSM 20533 = JCM 1125 [CP018888]
Start position on genome 239317
End posion on genome 239408
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gttttatttT
tRNA gene sequence 
GGAGAATTGTCCGAGCGGCCGAAGGAGCATGATTGGAAATCATGTATATGGATTATATCT
GTATCAAGGGTTCGAATCCCTTATTCTCCGTtt
Downstream region at tRNA end position 
tagtgtttat
Secondary structure (Cloverleaf model)
>C171085939	Ser	GGA
                   T      GTtt tagtgtttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATATGGATTATATCTGTATC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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