The detailed information of tRNA gene sequence


Sequence ID>C171086311
Genome IDCP018913
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia rickettsii Iowa [CP018913]
Start position on genome 105983
End posion on genome 106057
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aaataatctt
tRNA gene sequence 
GCTACTATAGCTCAGGGGTAGAGCACTTCATTGGTAATGAAGAGGTCGGGGGTTCGATTC
CCCCTAGTAGCACCA
Downstream region at tRNA end position 
ccacacatcc
Secondary structure (Cloverleaf model)
>C171086311	Thr	GGT
                   t      ACCA ccacacatcc
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A
                     A - T          T T
                    T     C C C C C     A
        G A        A      | | | | |     G
      G     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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