The detailed information of tRNA gene sequence


Sequence ID>C171086350
Genome IDCP018914
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia rickettsii Iowa [CP018914]
Start position on genome 487645
End posion on genome 487719
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acactgatta
tRNA gene sequence 
GGCTGGGTAGCAAAGTGGTAATGCCGTGGACTGCAAATCCTCTATTCGTCGGTTCGATTC
CGACCCTGGCCTCCA
Downstream region at tRNA end position 
ttatagaaat
Secondary structure (Cloverleaf model)
>C171086350	Cys	GCA
                   a      TCCA ttatagaaat
                     G - C
                     G - C
                     C - G
                     T + G
                     G + T
                     G - C
                     G - C          T T
                    T     C A G C C     A
        G A        A      | | | | |     G
      T     A A C G       G T C G G     C
      G       | | |                 T T
      G     A T G C
        T A        C     TATTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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