The detailed information of tRNA gene sequence


Sequence ID>C171088785
Genome IDCP019046
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalioglobus pacificus RR3-57 [CP019046]
Start position on genome 886944
End posion on genome 886869
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaaagatat
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttttatggca
Secondary structure (Cloverleaf model)
>C171088785	Trp	CCA
                   t      GCCA ttttatggca
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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