The detailed information of tRNA gene sequence


Sequence ID>C171088792
Genome IDCP019046
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalioglobus pacificus RR3-57 [CP019046]
Start position on genome 239186
End posion on genome 239096
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacgtcttc
tRNA gene sequence 
GGAGAGCTGGCCGAGTGGCTGAAGGCGCACCCCTGCTAAGGGTGTATAGGCTAATACCCT
ATCGAGGGTTCGAATCCCTCGCTCTCCGCCA
Downstream region at tRNA end position 
tatatctatt
Secondary structure (Cloverleaf model)
>C171088792	Ser	GCT
                   c      GCCA tatatctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGCTAATACCCTATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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