The detailed information of tRNA gene sequence


Sequence ID>C171088884
Genome IDCP019058
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis GV37 [CP019058]
Start position on genome 318688
End posion on genome 318775
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaaacaagt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAGCGGC
TCGAGAGTTCGAATCTCTCTGACTCCGCgg
Downstream region at tRNA end position 
attactccgg
Secondary structure (Cloverleaf model)
>C171088884	Ser	GCT
                   t      GCgg attactccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G A G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTAAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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